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sismid
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Pathogen evolution, selection and immunity
Source code
github.com/trvrb/
sismid
Contributors
trvrb
sarahCobey
tethig
Latest commits
17 Jul 2019 -
Revise B cell slides
16 Jul 2019 -
Update readme
16 Jul 2019 -
Fix forecasting link
16 Jul 2019 -
Update lineup
16 Jul 2019 -
Revise timeseries slides
Pages
/ sequences / practical / beast
/ sequences / practical / beauti
/ sequences / practical / data
/ sequences / practical / figtree
/ lineup / norovirus /
/ immunity /
/ bcells /
/ timeseries / exercise /
/ timeseries /
/ lineup / swine-flu /
/ lineup / malaria /
/ lineup / pneumo /
/ lineup / dengue /
/ lineup / hiv /
/ lineup / pertussis /
/ lineup / rotavirus /
/ lineup / enterovirus /
/ lineup /
/ pathogens /
/ models / exercise /
/ models /
/ sequences / practical /
/ sequences /
/ serology /
/ selection /
/ forecasting /
/
/ selection / mutation-drift-exercise
/ selection / mutation-drift-selection-exercise
/ selection / mutation-drift-selection-statistics
/ selection / mutation-drift-statistics
/ python
/ sequences / practical / tracer
/ sequences / practical / vaccines
Lineup of example pathogens
Dengue
Enterovirus 71
HIV
Malaria
Norovirus
Pertussis
Pneumococcus
Rotavirus
Swine flu