Pathogen evolution, selection and immunity

Source code

github.com/trvrb/sismid

Contributors

Latest commits

17 Jul 2019 - Revise B cell slides

16 Jul 2019 - Update readme

16 Jul 2019 - Fix forecasting link

16 Jul 2019 - Update lineup

16 Jul 2019 - Revise timeseries slides

Pages

/ sequences / practical / beast

/ sequences / practical / beauti

/ sequences / practical / data

/ sequences / practical / figtree

/ lineup / norovirus /

/ immunity /

/ bcells /

/ timeseries / exercise /

/ timeseries /

/ lineup / swine-flu /

/ lineup / malaria /

/ lineup / pneumo /

/ lineup / dengue /

/ lineup / hiv /

/ lineup / pertussis /

/ lineup / rotavirus /

/ lineup / enterovirus /

/ lineup /

/ pathogens /

/ models / exercise /

/ models /

/ sequences / practical /

/ sequences /

/ serology /

/ selection /

/ forecasting /

/

/ selection / mutation-drift-exercise

/ selection / mutation-drift-selection-exercise

/ selection / mutation-drift-selection-statistics

/ selection / mutation-drift-statistics

/ python

/ sequences / practical / tracer

/ sequences / practical / vaccines

Lineup of example pathogens