Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data

Run the logistic growth analysis

Open BEAST, select the file pandemic_logistic.xml and choose ‘Run’.

This will produce the output files pandemic_logistic.log and pandemic_logistic.trees, again taking ~16 hours to complete on a single cluster node.

I’ve included these files with the practical as output/pandemic_logistic.log and output/pandemic_logistic.trees.

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