Pipelines to do MinION sequencing of Zika virus

Experimental protocols and bioinformatic pipelines for Zika genome sequencing

Allison Black1,2, Barney Potter2, Josh Quick3, Nicholas J. Loman3, Nathan D Grubaugh4, Kristian G Andersen4, Trevor Bedford2

1Department of Epidemiology, University of Washington, Seattle, WA, USA, 2Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA, 3Institute of Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham, UK, 4The Scripps Research Institute, La Jolla, CA, USA.