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sacra
database-ideas
Cleaning scripts for real-time pathogen analysis
Source code
github.com/nextstrain/
sacra
Contributors
barneypotter24
jameshadfield
trvrb
tsibley
victorlin
lmoncla
Latest commits
11 May 2022 -
Merge pull request #22: Migrate CI to GitHub Actions
05 May 2022 -
Migrate CI to GitHub Actions
11 Jun 2018 -
Merge pull request #20 from nextstrain/misc-tweaks Misc tweaks
07 Jun 2018 -
Declare dependencies with version ranges rather than single versions …and lock exact versions in a simple, hopefully obvious requirements-locked.txt file. Notably, the exact versions are locked with `pip freeze` so that transitive deps are included as well. This matches changes in augur, where using `pip freeze` is much more useful with a larger and more varied set of deps. I generated the requirements-locked.txt using `pip freeze --local` in a clean virtualenv after installing requirements.txt.
07 Jun 2018 -
Remove old-src/ No longer necessary and always available in git history if needed. This declutters the repo and git grep output.
Pages
/ database-ideas
/
Possible Database schemes
Modification of current fauna
User databases:
\_
tables each
has it's own primary key/optional columns