Cryptic transmission of SARS-CoV-2 in Washington State

Source code

github.com/blab/ncov-cryptic-transmission

Contributors

Latest commits

07 Sep 2020 - Call missing 17747 sites and update augur output

05 Aug 2020 - Include BEAST clock analysis

05 Aug 2020 - Update BEAST WA clade analysis

05 Aug 2020 - Update WA clade augur build

04 Aug 2020 - Update augur build for introductions

Pages

/ augur-build-wa-clade / config / description

/ augur-build-introductions / config / description

/ augur-build-introductions /

/ forward-sim / transPhyloTools / phyTreeFromTransTree /

/ forward-sim / transPhyloTools / augmentTransTree /

/ forward-sim / transPhyloTools / observeTransTree /

/ forward-sim / transPhyloTools /

/ forward-sim /

/

/ augur-build-wa-clade /

Cryptic transmission of SARS-CoV-2 in Washington State

Analysis Code