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Pipeline components for real-time phylodynamic analysis
Source code
github.com/nextstrain/
augur
Contributors
huddlej
rneher
trvrb
jameshadfield
victorlin
tsibley
emmahodcroft
joverlee521
corneliusroemer
barneypotter24
Latest commits
26 May 2023 -
version 22.0.2
26 May 2023 -
Merge pull request #1235 from nextstrain/set-date-col-dtype Set `date` column to be `string`
26 May 2023 -
Update changelog
26 May 2023 -
read_metadata: add dtype for `METADATA_DATE_COLUMN` Avoid Pandas type inference for the date column because it could contain incomplete year only dates that get inferred as int.
26 May 2023 -
Move `METADATA_DATE_COLUMN` to augur.io.metadata Moving in preparation to set dtype for the column in `read_metadata` in following commit. This is also a constant value that should apply to all uses of metadata, not just within augur.filter.
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/ docs / faq / lat_longs
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/ docs / releases / v6
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